STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP37414.1SNF2 family N-terminal domain-containing protein. (449 aa)    
Predicted Functional Partners:
SFP37382.1
Hypothetical protein.
 
     0.946
SFP52513.1
DNA-directed RNA polymerase subunit omega.
    
 0.915
SFP65845.1
RNA polymerase Rpb2, domain 2.
    
 0.911
SFP29308.1
DNA polymerase I.
  
 0.860
SFP64587.1
DNA polymerase III beta subunit, central domain.
   
 0.808
SFP10903.1
DNA-directed RNA polymerase subunit alpha.
    
  0.804
SFP10970.1
DNA-directed RNA polymerase subunit alpha.
    
  0.804
SFP65822.1
DNA-directed RNA polymerase subunit beta'.
    
  0.786
SFP37437.1
Hypothetical protein.
       0.781
SFP36422.1
Hypothetical protein.
 
     0.776
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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