STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP50662.1Adenylosuccinate lyase. (457 aa)    
Predicted Functional Partners:
SFP01529.1
Phosphoribosylformylglycinamidine synthase.
  
  
 0.999
SFP17423.1
Phosphoribosylaminoimidazole-succinocarboxamide synthase.
 
 0.997
SFP79196.1
Adenylosuccinate synthetase.
 0.997
SFP18006.1
Phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase.
  
 0.995
SFP17983.1
Phosphoribosylamine--glycine ligase.
  
 0.976
SFP22183.1
Adenylate kinase.
   
 0.975
SFP22312.1
Adenine phosphoribosyltransferase.
  
 0.967
SFP75201.1
5-(carboxyamino)imidazole ribonucleotide mutase.
  
 
 0.967
SFP81145.1
Amidophosphoribosyltransferase.
  
 
 0.962
SFP25947.1
phosphoribosyl-AMP cyclohydrolase.
  
 
 0.931
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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