STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP51367.1Serine O-acetyltransferase. (324 aa)    
Predicted Functional Partners:
SFP07978.1
Cysteine synthase A.
 
 0.931
SFP67800.1
Cysteine synthase A.
 
 0.927
SFP57918.1
Cysteine synthase A.
 
 0.926
SFP58029.1
Cysteine synthase A.
  
 0.907
SFP52691.1
cysteinyl-tRNA synthetase.
 
 
 0.899
SFP03890.1
Indole-3-glycerol phosphate synthase.
     
 0.857
SFP48859.1
Aspartate kinase.
    
 0.821
SFP51576.1
O-acetylhomoserine (thiol)-lyase.
    
 0.710
SFP01980.1
O-acetylhomoserine (thiol)-lyase.
    
 0.670
SFP67660.1
Methionine synthase (B12-dependent).
    
 0.622
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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