STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP51625.1Membrane-bound lytic murein transglycosylase MltF. (519 aa)    
Predicted Functional Partners:
SFP51600.1
Uncharacterized conserved protein YfcZ, UPF0381/DUF406 family.
       0.592
SFP00589.1
Transglycosylase SLT domain-containing protein.
 
   
 0.517
SFO96778.1
Soluble lytic murein transglycosylase.
 
   
 0.484
SFP51651.1
Putrescine transport system substrate-binding protein.
       0.484
SFP01529.1
Phosphoribosylformylglycinamidine synthase.
     
 0.453
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.