STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP57418.1nanoRNase/pAp phosphatase, hydrolyzes c-di-AMP and oligoRNAs. (538 aa)    
Predicted Functional Partners:
SFP03803.1
Ribosome-binding factor A.
  
    0.654
SFP01190.1
Ferric uptake regulator family protein.
  
     0.614
SFP19119.1
Phosphoglycolate phosphatase.
 
   
  0.570
SFO98610.1
Adenylylsulfate reductase subunit B.
  
  
  0.516
SFP58840.1
single-stranded-DNA-specific exonuclease.
    
 0.482
SFP57383.1
N-acetylglutamate synthase.
       0.446
SFO98683.1
Sulfate adenylyltransferase subunit 1.
   
 
  0.444
SFP45292.1
Aminoglycoside 3-N-acetyltransferase.
  
     0.401
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.