STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP58813.1Polyphosphate glucokinase. (265 aa)    
Predicted Functional Partners:
SFP00431.1
PTS system, glucose-specific IIA component.
 
 
 0.937
SFP66342.1
Glucose-6-phosphate isomerase.
    
 0.934
SFP17269.1
Fructose-bisphosphate aldolase.
    
 0.929
SFP03311.1
Glucokinase.
    
 0.921
SFP08112.1
Phosphoglucomutase.
    
 0.919
SFP17311.1
Transketolase.
  
 
 0.919
SFP52424.1
2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase.
    
 0.913
SFP58736.1
tRNA threonylcarbamoyladenosine biosynthesis protein TsaE.
    
  0.626
SFP50876.1
AraC-type DNA-binding protein.
    
 0.624
SFP01156.1
PKD domain-containing protein.
  
  
  0.604
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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