STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP66295.1Ketol-acid reductoisomerase. (494 aa)    
Predicted Functional Partners:
SFO96474.1
Acetolactate synthase, small subunit.
 
 
 0.997
SFO96501.1
Acetolactate synthase, large subunit.
 
 
 0.991
SFP47996.1
Dihydroxy-acid dehydratase.
  
 
 0.988
SFP18140.1
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit.
  
  
 0.944
SFP18120.1
3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit.
  
  
 0.938
SFP18165.1
3-isopropylmalate dehydrogenase.
 
  
 0.803
SFO96223.1
Molybdate transport system ATP-binding protein.
 
 
   0.793
SFP23859.1
Glutamate synthase (NADPH/NADH) large chain.
  
  
 0.774
SFP48809.1
Threonine synthase.
 
  
 0.747
SFP66323.1
LysR family transcriptional regulator, positive regulator for ilvC.
 
   
 0.716
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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