STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP67336.1Hypothetical protein. (758 aa)    
Predicted Functional Partners:
SFP48859.1
Aspartate kinase.
  
 
 0.939
SFP23859.1
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.912
SFP33954.1
Glycosyltransferase, GT2 family.
  
 
 0.704
SFP67378.1
Protein of unknown function.
    
0.644
SFP67355.1
Hydrophobic W protein.
       0.613
SFP04373.1
Carbamoyl-phosphate synthase large subunit.
    
 0.582
SFP04112.1
NAD+ synthase (glutamine-hydrolysing).
    
 0.573
SFP79196.1
Adenylosuccinate synthetase.
  
 
 0.565
SFP57164.1
Aspartate kinase.
  
 
 0.541
SFP26928.1
seryl-tRNA synthetase.
     
 0.534
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.