STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP67336.1Hypothetical protein. (758 aa)    
Predicted Functional Partners:
SFP23859.1
Glutamate synthase (NADPH/NADH) large chain.
  
 
 0.940
SFP48859.1
Aspartate kinase.
  
 
 0.920
SFP02078.1
Aromatic-amino-acid transaminase.
   
 0.646
SFO96592.1
Aspartate-ammonia ligase.
   
 
 0.634
SFP67355.1
Hydrophobic W protein.
       0.613
SFP00250.1
Aspartate carbamoyltransferase.
  
 
 0.608
SFP79196.1
Adenylosuccinate synthetase.
  
 
 0.582
SFP11878.1
Argininosuccinate synthase.
   
 
 0.581
SFP10286.1
L-aspartate oxidase.
     
 0.573
SFP00271.1
Aspartate carbamoyltransferase regulatory subunit.
    
  0.559
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.