STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFP75635.1Large subunit ribosomal protein L1. (231 aa)    
Predicted Functional Partners:
SFP11129.1
Large subunit ribosomal protein L15.
 
 0.999
SFP11162.1
Large subunit ribosomal protein L30.
  
 0.999
SFP11229.1
Large subunit ribosomal protein L18.
  
 0.999
SFP11258.1
Large subunit ribosomal protein L6.
  
 0.999
SFP11356.1
Large subunit ribosomal protein L5.
 
 0.999
SFP11385.1
Large subunit ribosomal protein L24.
  
 0.999
SFP11487.1
Large subunit ribosomal protein L29.
  
 0.999
SFP11580.1
Large subunit ribosomal protein L22.
  
 0.999
SFP11664.1
Large subunit ribosomal protein L2.
  
 0.999
SFP11732.1
Large subunit ribosomal protein L23.
  
 0.999
Your Current Organism:
Ruminobacter amylophilus
NCBI taxonomy Id: 867
Other names: ATCC 29744, Bacteroides amylophilus, R. amylophilus, Ruminobacter amylophilum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.