STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113437228Golgi apparatus membrane protein TVP23 homolog B-like. (207 aa)    
Predicted Functional Partners:
ULK2
Unc-51 like autophagy activating kinase 2.
    
   0.846
ULK1
Unc-51 like autophagy activating kinase 1.
    
   0.846
YIPF1
Yip1 domain family member 1.
   
 
 0.730
YIPF2
Yip1 domain family member 2.
   
 
 0.730
YIPF3
Yip1 domain family member 3.
   
 
 0.718
PDIK1L
PDLIM1 interacting kinase 1 like.
    
   0.681
STK35
Serine/threonine kinase 35.
    
   0.681
ULK3
Unc-51 like kinase 3.
    
   0.681
TMEM60
Transmembrane protein 60.
      
 0.561
PIGW
Phosphatidylinositol glycan anchor biosynthesis class W.
      
 0.535
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.