STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BBS9Bardet-Biedl syndrome 9. (802 aa)    
Predicted Functional Partners:
TTC8
Tetratricopeptide repeat domain 8.
    
 0.998
BBS2
Bardet-Biedl syndrome 2.
   
 0.998
ENSPTXP00000015905
annotation not available
    
 0.998
BBS4
Bardet-Biedl syndrome 4.
   
 0.998
BBS7
Bardet-Biedl syndrome 7.
    
 0.997
ENSPTXP00000004084
annotation not available
    
 0.990
KLHL41
Kelch like family member 41.
   
 0.985
ENSPTXP00000001576
annotation not available
   
 0.985
KLHL40
Kelch like family member 40.
   
 0.969
LZTFL1
Leucine zipper transcription factor like 1.
    
 0.969
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.