Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NOL7Nucleolar protein 7. (207 aa)    
Predicted Functional Partners:
UTP4
UTP4 small subunit processome component.
    
 
 0.987
WDR43
WD repeat domain 43.
    
 
 0.976
NOL11
Nucleolar protein 11.
    
 
 0.968
WDR75
WD repeat domain 75.
    
   0.966
UTP15
UTP15 small subunit processome component.
    
 
 0.954
FCF1
FCF1 rRNA-processing protein.
   
 
 0.916
UTP20
UTP20 small subunit processome component.
    
 
 0.889
HEATR1
HEAT repeat containing 1.
    
 
 0.889
NOP58
NOP58 ribonucleoprotein.
   
 
 0.852
NOL10
Nucleolar protein 10.
    
 
 0.811
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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