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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBX20T-box transcription factor 20. (442 aa)    
Predicted Functional Partners:
GSC
Goosecoid homeobox.
    
 
 0.935
DR1
Down-regulator of transcription 1.
     
 0.775
PHF13
PHD finger protein 13.
    
   0.739
SLC25A21
Solute carrier family 25 member 21.
    
   0.730
NKX2-5
NK2 homeobox 5.
   
 
 0.711
ENSPTXP00000000688
annotation not available
    
 
 0.698
TLE2
TLE family member 2, transcriptional corepressor.
    
 
 0.698
TLE4
TLE family member 4, transcriptional corepressor.
    
 
 0.698
LOC113438464
Transducin-like enhancer protein 1.
    
 
 0.698
TLE3
TLE family member 3, transcriptional corepressor.
    
 
 0.698
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.