Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ADAP1ArfGAP with dual PH domains 1. (377 aa)    
Predicted Functional Partners:
SH3YL1
SH3 and SYLF domain containing 1.
    
 
 0.566
ARFGAP1
ADP ribosylation factor GTPase activating protein 1.
    
 
 0.557
GAK
Cyclin G associated kinase.
    
 
 0.534
RPS6KC1
Ribosomal protein S6 kinase C1.
      
 0.526
RPS6KL1
Ribosomal protein S6 kinase like 1.
      
 0.511
UTP6
UTP6 small subunit processome component.
      
 0.510
TEFM
Transcription elongation factor, mitochondrial.
      
 0.494
DDX46
DEAD-box helicase 46.
    
   0.494
PICALM
Phosphatidylinositol binding clathrin assembly protein.
   
   0.490
SNAP91
Synaptosome associated protein 91.
   
   0.490
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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