Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ARL1ADP ribosylation factor like GTPase 1. (181 aa)    
Predicted Functional Partners:
GOLGA4
Golgin A4.
    
 0.977
COG6
Component of oligomeric golgi complex 6.
   
 0.963
STX16
Syntaxin 16.
    
 0.960
SCOC
Short coiled-coil protein.
   
 
 0.955
GBF1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
    
 0.949
COG8
Component of oligomeric golgi complex 8.
    
 0.949
MON2
MON2 homolog, regulator of endosome-to-Golgi trafficking.
    
 
 0.939
GCC2
GRIP and coiled-coil domain containing 2.
   
 0.937
ARFGEF1
ADP ribosylation factor guanine nucleotide exchange factor 1.
    
 
 0.932
ARFIP2
ADP ribosylation factor interacting protein 2.
    
 0.921
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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