Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113438766Vacuolar fusion protein CCZ1 homolog. (478 aa)    
Predicted Functional Partners:
RAB7A
RAB7A, member RAS oncogene family.
    
 0.997
MON1A
MON1 homolog A, secretory trafficking associated.
    
 0.993
MON1B
MON1 homolog B, secretory trafficking associated.
    
 0.993
RMC1
Regulator of MON1-CCZ1.
    
 0.979
RAB7B
RAB7B, member RAS oncogene family.
    
 0.977
GRIPAP1
GRIP1 associated protein 1.
    
 0.964
VPS39
VPS39 subunit of HOPS complex.
    
 
 0.962
VPS11
VPS11 core subunit of CORVET and HOPS complexes.
   
 
 0.962
VPS18
VPS18 core subunit of CORVET and HOPS complexes.
   
 
 0.960
VPS16
VPS16 core subunit of CORVET and HOPS complexes.
    
 
 0.960
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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