Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNAI2Snail family transcriptional repressor 2. (268 aa)    
Predicted Functional Partners:
KDM1A
Lysine demethylase 1A.
    
 0.897
RCOR1
REST corepressor 1.
    
 0.890
FBXL14
F-box and leucine rich repeat protein 14.
   
 
 0.867
BTRC
Beta-transducin repeat containing E3 ubiquitin protein ligase.
    
 
 0.867
HMG20B
High mobility group 20B.
    
   0.852
HMG20A
High mobility group 20A.
    
   0.852
EP300
E1A binding protein p300.
    
 
 0.844
DNMT1
DNA methyltransferase 1.
    
 
 0.839
USP10
Ubiquitin specific peptidase 10.
    
   0.832
MDM2
MDM2 proto-oncogene.
    
 
 0.803
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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