Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPTXP00000001643annotation not available (439 aa)    
Predicted Functional Partners:
ENSPTXP00000003800
annotation not available
    
 
 0.944
PGGT1B
Protein geranylgeranyltransferase type I subunit beta.
 
  
 
 0.648
ST8SIA4
ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4.
     
 0.618
NEXMIF
Neurite extension and migration factor.
      
 0.599
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.597
FEM1B
Fem-1 homolog B.
   
 0.594
NME8
NME/NM23 family member 8.
    
 0.582
ARID4A
AT-rich interaction domain 4A.
    
 0.579
ARID4B
AT-rich interaction domain 4B.
    
 0.579
RLIM
Ring finger protein, LIM domain interacting.
    
 
 0.565
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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