Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDE1APhosphodiesterase 1A. (556 aa)    
Predicted Functional Partners:
ENTPD8
Ectonucleoside triphosphate diphosphohydrolase 8.
     
 0.918
ENTPD1
Ectonucleoside triphosphate diphosphohydrolase 1.
     
 0.918
ENPP3
Ectonucleotide pyrophosphatase/phosphodiesterase 3.
     
 0.910
ENPP1
Ectonucleotide pyrophosphatase/phosphodiesterase 1.
     
 0.910
APRT
Adenine phosphoribosyltransferase.
     
 0.910
AK3
Adenylate kinase 3.
     
 0.909
ADK
Adenosine kinase.
     
 0.902
ADSL
Adenylosuccinate lyase.
     
  0.900
GUK1
Guanylate kinase 1.
     
  0.900
HPRT1
Hypoxanthine phosphoribosyltransferase 1.
     
  0.900
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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