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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAGAPT cell activation RhoGTPase activating protein. (586 aa)    
Predicted Functional Partners:
CDC42
Cell division cycle 42.
   
 0.776
RAC2
Rac family small GTPase 2.
   
 0.661
RAC1
Rac family small GTPase 1.
   
 0.661
RAC3
Rac family small GTPase 3.
   
 0.661
ENSPTXP00000006066
annotation not available
   
 0.661
RHOF
Ras homolog family member F, filopodia associated.
   
 0.655
RHOC
Ras homolog family member C.
   
 0.653
RHOA
Ras homolog family member A.
   
 0.653
LOC113443339
Transforming protein RhoA-like.
   
 0.653
RHOB
Ras homolog family member B.
   
 0.653
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.