Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TAGAPT cell activation RhoGTPase activating protein. (586 aa)    
Predicted Functional Partners:
SNTA1
Syntrophin alpha 1.
    
   0.782
RIPOR3
RIPOR family member 3.
   
  
 0.769
CDC42
Cell division cycle 42.
   
 0.629
GJD4
Gap junction protein delta 4.
   
  
 0.621
ENSPTXP00000017337
annotation not available
      
 0.616
ENSPTXP00000017339
annotation not available
      
 0.616
RND1
Rho family GTPase 1.
    
 0.605
RHOC
Ras homolog family member C.
    
 0.605
RHOA
Ras homolog family member A.
    
 0.605
LOC113443339
Transforming protein RhoA-like.
    
 0.605
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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