Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATPAF1ATP synthase mitochondrial F1 complex assembly factor 1. (313 aa)    
Predicted Functional Partners:
ATP5F1B
ATP synthase F1 subunit beta.
    
 
 0.976
ATPAF2
ATP synthase mitochondrial F1 complex assembly factor 2.
   
 
 0.945
CDCA8
Cell division cycle associated 8.
    
 
 0.889
REV3L
REV3 like, DNA directed polymerase zeta catalytic subunit.
      
 0.887
PUM1
Pumilio RNA binding family member 1.
    
 
 0.814
PUM2
Pumilio RNA binding family member 2.
    
 
 0.814
ERAL1
Era like 12S mitochondrial rRNA chaperone 1.
    
   0.808
OGG1
8-oxoguanine DNA glycosylase.
      
 0.794
ATP5F1A
ATP synthase F1 subunit alpha.
    
 
 0.727
ATP5F1C
ATP synthase F1 subunit gamma.
   
  
 0.696
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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