ENSPTXP00000001945 protein (Pseudonaja textilis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSPTXP00000001945

annotation not available (122 aa)

Predicted Functional Partners:

ENSPTXP00000012642

0.900

PDZK1

0.780

SLC5A9

0.616

SLC5A10

0.616

SLC5A1

0.616

ENSPTXP00000008435

0.560

SYS1

0.554

TMEM223

0.528

SLC5A11

0.499

TMBIM4

0.426

Your Current Organism:

Pseudonaja textilis

NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSPTXP00000001945	ENSPTXP00000008435	ENSPTXP00000001945	ENSPTXP00000008435	annotation not available	annotation not available	0.560
ENSPTXP00000001945	ENSPTXP00000012642	ENSPTXP00000001945	ENSPTXP00000012642	annotation not available	annotation not available	0.900
ENSPTXP00000001945	PDZK1	ENSPTXP00000001945	ENSPTXP00000006426	annotation not available	PDZ domain containing 1.	0.780
ENSPTXP00000001945	SLC5A1	ENSPTXP00000001945	ENSPTXP00000027229	annotation not available	Solute carrier family 5 member 1.	0.616
ENSPTXP00000001945	SLC5A10	ENSPTXP00000001945	ENSPTXP00000004125	annotation not available	Solute carrier family 5 member 10.	0.616
ENSPTXP00000001945	SLC5A11	ENSPTXP00000001945	ENSPTXP00000008077	annotation not available	Solute carrier family 5 member 11.	0.499
ENSPTXP00000001945	SLC5A9	ENSPTXP00000001945	ENSPTXP00000002001	annotation not available	Solute carrier family 5 member 9.	0.616
ENSPTXP00000001945	SYS1	ENSPTXP00000001945	ENSPTXP00000010601	annotation not available	SYS1 golgi trafficking protein.	0.554
ENSPTXP00000001945	TMBIM4	ENSPTXP00000001945	ENSPTXP00000010527	annotation not available	Transmembrane BAX inhibitor motif containing 4.	0.426
ENSPTXP00000001945	TMEM223	ENSPTXP00000001945	ENSPTXP00000013577	annotation not available	Transmembrane protein 223.	0.528
ENSPTXP00000008435	ENSPTXP00000001945	ENSPTXP00000008435	ENSPTXP00000001945	annotation not available	annotation not available	0.560
ENSPTXP00000012642	ENSPTXP00000001945	ENSPTXP00000012642	ENSPTXP00000001945	annotation not available	annotation not available	0.900
PDZK1	ENSPTXP00000001945	ENSPTXP00000006426	ENSPTXP00000001945	PDZ domain containing 1.	annotation not available	0.780
SLC5A1	ENSPTXP00000001945	ENSPTXP00000027229	ENSPTXP00000001945	Solute carrier family 5 member 1.	annotation not available	0.616
SLC5A10	ENSPTXP00000001945	ENSPTXP00000004125	ENSPTXP00000001945	Solute carrier family 5 member 10.	annotation not available	0.616
SLC5A11	ENSPTXP00000001945	ENSPTXP00000008077	ENSPTXP00000001945	Solute carrier family 5 member 11.	annotation not available	0.499
SLC5A9	ENSPTXP00000001945	ENSPTXP00000002001	ENSPTXP00000001945	Solute carrier family 5 member 9.	annotation not available	0.616
SYS1	ENSPTXP00000001945	ENSPTXP00000010601	ENSPTXP00000001945	SYS1 golgi trafficking protein.	annotation not available	0.554
TMBIM4	ENSPTXP00000001945	ENSPTXP00000010527	ENSPTXP00000001945	Transmembrane BAX inhibitor motif containing 4.	annotation not available	0.426
TMEM223	ENSPTXP00000001945	ENSPTXP00000013577	ENSPTXP00000001945	Transmembrane protein 223.	annotation not available	0.528