Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CDK13Cyclin dependent kinase 13. (1538 aa)    
Predicted Functional Partners:
CCNK
Cyclin K.
   
 0.980
CDK9
Cyclin dependent kinase 9.
    
0.958
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
    
 0.948
POLR2A
RNA polymerase II subunit A.
   
 0.942
CDK7
Cyclin dependent kinase 7.
   
0.938
CCNT1
Cyclin T1.
   
 0.907
CCNT2
Cyclin T2.
   
 0.905
CCNH
Cyclin H.
    
 0.875
SETD2
SET domain containing 2, histone lysine methyltransferase.
   
 
 0.866
MNAT1
MNAT1 component of CDK activating kinase.
    
 0.853
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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