STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBM12RNA binding motif protein 12. (880 aa)    
Predicted Functional Partners:
YLPM1
YLP motif containing 1.
      
 0.558
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
    
 0.554
RAD23A
RAD23 homolog A, nucleotide excision repair protein.
    
 0.554
RLIM
Ring finger protein, LIM domain interacting.
   
  
 0.540
ASB12
Ankyrin repeat and SOCS box containing 12.
    
 
 0.534
PWWP2B
PWWP domain containing 2B.
      
 0.527
UBXN7
UBX domain protein 7.
    
  0.507
ENSPTXP00000000840
annotation not available
    
  0.507
SIDT2
SID1 transmembrane family member 2.
    
  0.507
CROCC
Ciliary rootlet coiled-coil, rootletin.
    
  0.507
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.