STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGALS8Galectin 8. (297 aa)    
Predicted Functional Partners:
ENSPTXP00000020066
annotation not available
    
 
 0.962
TAX1BP1
Tax1 binding protein 1.
   
 
 0.673
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
    
 0.586
FAM20B
FAM20B glycosaminoglycan xylosylkinase.
    
 0.543
ITGA3
Integrin subunit alpha 3.
    
 
 0.483
SAMD7
Sterile alpha motif domain containing 7.
    
 0.482
SERINC2
Serine incorporator 2.
      
 0.468
ITGA1
Integrin subunit alpha 1.
    
 
 0.460
VPS13A
Vacuolar protein sorting 13 homolog A.
   
 
 0.455
VPS13C
Vacuolar protein sorting 13 homolog C.
   
 
 0.455
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.