STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSM14BLSM family member 14B. (422 aa)    
Predicted Functional Partners:
DDX6
DEAD-box helicase 6.
   
 0.995
EIF4ENIF1
Eukaryotic translation initiation factor 4E nuclear import factor 1.
   
 0.989
YBX1
Y-box binding protein 1.
   
 0.939
DCP2
Decapping mRNA 2.
    
 
 0.936
CPEB1
Cytoplasmic polyadenylation element binding protein 1.
   
 0.920
EDC3
Enhancer of mRNA decapping 3.
    
 
 0.911
CRCP
CGRP receptor component.
     
 0.891
POLR3F
RNA polymerase III subunit F.
   
  0.881
POLR3C
RNA polymerase III subunit C.
    
  0.879
STAU1
Staufen double-stranded RNA binding protein 1.
    
 0.869
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.