Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MRPL34Mitochondrial ribosomal protein L34. (106 aa)    
Predicted Functional Partners:
MRPS30
Mitochondrial ribosomal protein S30.
    
 
 0.987
MRPS14
Mitochondrial ribosomal protein S14.
   
 
 0.981
MRPL13
Mitochondrial ribosomal protein L13.
   
 
 0.980
MRPL52
Mitochondrial ribosomal protein L52.
   
 
 0.980
MRPL41
Mitochondrial ribosomal protein L41.
   
 
 0.977
NDUFAB1
NADH:ubiquinone oxidoreductase subunit AB1.
   
  0.976
MRPL46
Mitochondrial ribosomal protein L46.
   
 
 0.976
MRPL47
Mitochondrial ribosomal protein L47.
   
 
 0.974
GADD45GIP1
GADD45G interacting protein 1.
   
   0.974
MRPL28
Mitochondrial ribosomal protein L28.
   
   0.973
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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