STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTBP1Polypyrimidine tract binding protein 1. (557 aa)    
Predicted Functional Partners:
HNRNPK
Heterogeneous nuclear ribonucleoprotein K.
   
 0.833
HNRNPLL
Heterogeneous nuclear ribonucleoprotein L like.
   
0.825
HNRNPL
Heterogeneous nuclear ribonucleoprotein L.
   
0.825
HNRNPA2B1
Heterogeneous nuclear ribonucleoprotein A2/B1.
   
 0.796
ENSPTXP00000014529
annotation not available
    
 0.785
SRSF2
Serine and arginine rich splicing factor 2.
   
 0.760
SRSF1
Serine and arginine rich splicing factor 1.
   
 0.753
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D like.
   
 0.746
LOC113451031
Heterogeneous nuclear ribonucleoproteins C1/C2.
   
 0.741
LOC113449459
Heterogeneous nuclear ribonucleoproteins C1/C2-like.
   
 0.741
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.