EPHA4 protein (Pseudonaja textilis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

EPHA4

EPH receptor A4. (986 aa)

Predicted Functional Partners:

EFNA5

0.927

EFNA2

0.864

EFNB2

0.849

EFNA1

0.821

EFNA3

0.815

EFNA4

0.810

EFNB1

0.769

ENSPTXP00000023755

0.769

ENSPTXP00000023242

0.730

EPHA2

0.697

Your Current Organism:

Pseudonaja textilis

NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EFNA1	EFNA2	ENSPTXP00000011971	ENSPTXP00000003614	Ephrin A1.	Ephrin A2.	0.533
EFNA1	EFNA3	ENSPTXP00000011971	ENSPTXP00000011970	Ephrin A1.	Ephrin A3.	0.613
EFNA1	EFNA4	ENSPTXP00000011971	ENSPTXP00000011969	Ephrin A1.	Ephrin A4.	0.478
EFNA1	EFNA5	ENSPTXP00000011971	ENSPTXP00000007991	Ephrin A1.	Ephrin A5.	0.599
EFNA1	EFNB1	ENSPTXP00000011971	ENSPTXP00000014833	Ephrin A1.	Ephrin B1.	0.711
EFNA1	EFNB2	ENSPTXP00000011971	ENSPTXP00000016498	Ephrin A1.	Ephrin B2.	0.730
EFNA1	ENSPTXP00000023242	ENSPTXP00000011971	ENSPTXP00000023242	Ephrin A1.	annotation not available	0.564
EFNA1	ENSPTXP00000023755	ENSPTXP00000011971	ENSPTXP00000023755	Ephrin A1.	annotation not available	0.711
EFNA1	EPHA2	ENSPTXP00000011971	ENSPTXP00000026716	Ephrin A1.	EPH receptor A2.	0.999
EFNA1	EPHA4	ENSPTXP00000011971	ENSPTXP00000004331	Ephrin A1.	EPH receptor A4.	0.821
EFNA2	EFNA1	ENSPTXP00000003614	ENSPTXP00000011971	Ephrin A2.	Ephrin A1.	0.533
EFNA2	EFNA3	ENSPTXP00000003614	ENSPTXP00000011970	Ephrin A2.	Ephrin A3.	0.474
EFNA2	EFNA4	ENSPTXP00000003614	ENSPTXP00000011969	Ephrin A2.	Ephrin A4.	0.502
EFNA2	EFNA5	ENSPTXP00000003614	ENSPTXP00000007991	Ephrin A2.	Ephrin A5.	0.664
EFNA2	EFNB1	ENSPTXP00000003614	ENSPTXP00000014833	Ephrin A2.	Ephrin B1.	0.735
EFNA2	EFNB2	ENSPTXP00000003614	ENSPTXP00000016498	Ephrin A2.	Ephrin B2.	0.760
EFNA2	ENSPTXP00000023242	ENSPTXP00000003614	ENSPTXP00000023242	Ephrin A2.	annotation not available	0.601
EFNA2	ENSPTXP00000023755	ENSPTXP00000003614	ENSPTXP00000023755	Ephrin A2.	annotation not available	0.735
EFNA2	EPHA2	ENSPTXP00000003614	ENSPTXP00000026716	Ephrin A2.	EPH receptor A2.	0.994
EFNA2	EPHA4	ENSPTXP00000003614	ENSPTXP00000004331	Ephrin A2.	EPH receptor A4.	0.864