STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB33ARAB33A, member RAS oncogene family. (208 aa)    
Predicted Functional Partners:
ATG16L1
Autophagy related 16 like 1.
    
 0.919
ATG16L2
Autophagy related 16 like 2.
    
 0.905
TRAPPC6B
Trafficking protein particle complex 6B.
   
 0.875
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.875
TRAPPC4
Trafficking protein particle complex 4.
    
 0.874
TRAPPC1
Trafficking protein particle complex 1.
    
 0.874
TRAPPC2B
Trafficking protein particle complex 2.
    
 0.871
TRAPPC5
Trafficking protein particle complex 5.
    
 0.868
TRAPPC8
Trafficking protein particle complex 8.
    
 0.862
RABGGTB
Rab geranylgeranyltransferase subunit beta.
    
 0.829
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.