STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMI1BMI1 proto-oncogene, polycomb ring finger. (327 aa)    
Predicted Functional Partners:
CBX8
Chromobox 8.
    
 0.973
ENSPTXP00000024520
annotation not available
   
 0.963
FBXL19
F-box and leucine rich repeat protein 19.
   
 0.954
KDM2B
Lysine demethylase 2B.
   
 0.954
KDM2A
Lysine demethylase 2A.
   
 0.954
ENSPTXP00000021466
annotation not available
   
 0.954
ENSPTXP00000022551
annotation not available
   
 0.954
ENSPTXP00000022553
annotation not available
   
 0.954
CBX4
Chromobox 4.
    
 0.941
CBX7
Chromobox 7.
    
 0.937
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.