STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDF1Endothelial differentiation related factor 1. (268 aa)    
Predicted Functional Partners:
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
   0.992
RPL35
Ribosomal protein L35.
  
 
 0.959
RPS3
Ribosomal protein S3.
  
 
 0.958
RPS21
Ribosomal protein S21.
   
 
 0.954
RPS10
Ribosomal protein S10.
   
 
 0.953
RPS2
Ribosomal protein S2.
  
   0.950
RPL36
Ribosomal protein L36.
   
   0.950
RPS16
Ribosomal protein S16.
  
 
 0.950
RPS5
Ribosomal protein S5.
   
   0.950
RPL32
Ribosomal protein L32.
  
 
 0.949
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.