STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKD2L1Polycystin 2 like 1, transient receptor potential cation channel. (835 aa)    
Predicted Functional Partners:
ENSPTXP00000008435
annotation not available
    
0.993
PKD1
Polycystin 1, transient receptor potential channel interacting.
    
0.985
ENSPTXP00000002354
annotation not available
    
0.784
ENSPTXP00000002356
annotation not available
    
0.784
ENSPTXP00000002357
annotation not available
    
0.784
EXOC5
Exocyst complex component 5.
     
 0.773
CCDC25
Coiled-coil domain containing 25.
    
 0.697
EXOC4
Exocyst complex component 4-like.
     
 0.679
RHO
Rhodopsin.
     
 0.668
EXOC1
Exocyst complex component 1.
     
 0.664
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.