STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDR42E1Short chain dehydrogenase/reductase family 42E, member 1. (391 aa)    
Predicted Functional Partners:
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.994
HSD17B7
Hydroxysteroid 17-beta dehydrogenase 7.
   
 0.968
CYP51A1
Lanosterol 14-alpha demethylase.
  
 0.954
SC5D
sterol-C5-desaturase.
  
 0.946
SQLE
Squalene epoxidase.
   
 
 0.930
FDFT1
Farnesyl-diphosphate farnesyltransferase 1.
  
 
 0.930
CYP7B1
25-hydroxycholesterol 7-alpha-hydroxylase.
  
 0.927
SIGMAR1
Sigma non-opioid intracellular receptor 1.
   
 
 0.907
ERG28
Ergosterol biosynthesis 28 homolog.
   
 
 0.905
CYP7A1
Cholesterol 7-alpha-monooxygenase.
  
 0.904
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.