STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GATCglutamyl-tRNA amidotransferase subunit C. (145 aa)    
Predicted Functional Partners:
LOC113448221
Cytochrome c oxidase subunit 7C, mitochondrial.
   
 0.996
UQCRB
Cytochrome b-c1 complex subunit 7.
   
 0.996
LOC113444979
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial.
   
 0.996
LOC113446622
Cytochrome b-c1 complex subunit 8.
   
 0.996
COX5A
Cytochrome c oxidase subunit 5A.
   
 0.996
UQCR10
Cytochrome b-c1 complex subunit 9.
   
 0.995
CYC1
Cytochrome c1, heme protein, mitochondrial.
   
 0.994
LOC113440671
Cytochrome b-c1 complex subunit 6, mitochondrial.
   
 0.992
UQCRFS1
Cytochrome b-c1 complex subunit Rieske, mitochondrial.
   
 0.991
AICDA
Activation induced cytidine deaminase.
   
 0.981
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.