STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPTXP00000016468annotation not available (329 aa)    
Predicted Functional Partners:
SMC3
Structural maintenance of chromosomes 3.
   
 0.977
SMC2
Structural maintenance of chromosomes 2.
   
 0.937
PDS5A
PDS5 cohesin associated factor A.
    
 0.904
SMC4
Structural maintenance of chromosomes 4.
   
 0.897
PDS5B
PDS5 cohesin associated factor B.
    
 0.890
RAD21
RAD21 cohesin complex component.
   
 0.884
ENSPTXP00000020452
annotation not available
   
 0.884
SMC5
Structural maintenance of chromosomes 5.
   
 0.884
ENSPTXP00000003306
annotation not available
   
 0.882
SMC1A
Structural maintenance of chromosomes 1A.
   
 0.882
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.