STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDE2SDE2 telomere maintenance homolog. (393 aa)    
Predicted Functional Partners:
CDC5L
Cell division cycle 5 like.
    
 0.992
PRPF19
pre-mRNA processing factor 19.
    
 0.992
CWC15
CWC15 spliceosome associated protein homolog.
    
 0.990
CDC40
Cell division cycle 40.
    
 0.990
BUD31
BUD31 homolog.
    
  0.989
SNRPA1
Small nuclear ribonucleoprotein polypeptide A.
    
  0.988
EFTUD2
Elongation factor Tu GTP binding domain containing 2.
    
  0.988
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
    
 0.987
SNRNP200
Small nuclear ribonucleoprotein U5 subunit 200.
    
  0.987
SNRNP40
Small nuclear ribonucleoprotein U5 subunit 40.
    
  0.984
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.