STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPTXP00000020904annotation not available (356 aa)    
Predicted Functional Partners:
RPS27A
Ribosomal protein S27a.
    
  0.727
ENSPTXP00000000516
annotation not available
   
 0.684
IFIH1
Interferon induced with helicase C domain 1.
   
 0.622
DHX58
DExH-box helicase 58.
   
 0.616
DDX58
DExD/H-box helicase 58.
    
  0.610
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.594
LOC113451928
Ubiquitin.
    
  0.594
UBE2L3
Ubiquitin conjugating enzyme E2 L3.
    
  0.587
ENSPTXP00000013684
annotation not available
    
  0.587
SMAD4
SMAD family member 4.
    
  0.576
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.