STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD16Ankyrin repeat domain-containing protein 16-like. (194 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.808
IFT81
Intraflagellar transport 81.
    
 0.700
IFT22
Intraflagellar transport 22.
    
 0.648
IFT88
Intraflagellar transport 88.
   
 0.643
RNASEL
Ribonuclease L.
 
 
  0.642
IFT52
Intraflagellar transport 52.
    
 0.637
MARS1
methionyl-tRNA synthetase 1.
   
 0.631
IFT172
Intraflagellar transport 172.
    
 0.629
IFT80
Intraflagellar transport 80.
   
 0.629
IFT57
Intraflagellar transport 57.
    
 0.623
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.