STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPTXP00000023721annotation not available (358 aa)    
Predicted Functional Partners:
LIG3
DNA ligase 3.
   
 0.988
LIG4
DNA ligase 4.
   
 0.968
XRCC6
X-ray repair cross complementing 6.
    
 0.957
PNKP
Polynucleotide kinase 3'-phosphatase.
   
 0.929
PRKDC
Protein kinase, DNA-activated, catalytic subunit.
    
 0.927
LIG1
DNA ligase 1.
   
 0.923
POLD1
DNA polymerase delta 1, catalytic subunit.
   
 0.917
ENSPTXP00000019487
annotation not available
   
 0.916
POLB
DNA polymerase beta.
   
 0.916
ERCC1
ERCC excision repair 1, endonuclease non-catalytic subunit.
     
 0.902
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.