STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113453048Ubiquitin thioesterase OTUB1-like. (262 aa)    
Predicted Functional Partners:
UBE2N
Ubiquitin conjugating enzyme E2 N.
    
 0.938
UBE2D2
Ubiquitin conjugating enzyme E2 D2.
    
 0.837
UBE2D1
Ubiquitin conjugating enzyme E2 D1.
    
 0.837
RPS27A
Ribosomal protein S27a.
    
 
 0.837
UBE2D3
Ubiquitin conjugating enzyme E2 D3.
    
 0.837
UBE2T
Ubiquitin conjugating enzyme E2 T.
    
 0.837
UBE2E3
Ubiquitin conjugating enzyme E2 E3.
    
 0.773
UBE2E1
Ubiquitin conjugating enzyme E2 E1.
    
 0.773
UBE2E2
Ubiquitin-conjugating enzyme E2 E2.
    
 0.773
USP8
Ubiquitin specific peptidase 8.
    
 0.734
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.