STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSPTXP00000025103annotation not available (1120 aa)    
Predicted Functional Partners:
PCDH15
Protocadherin related 15.
   
0.961
ENSPTXP00000001783
annotation not available
   
 0.942
USH1C
USH1 protein network component harmonin.
   
 
 0.934
JUP
Junction plakoglobin.
    
 0.920
LOC113447577
Catenin beta-1.
    
 0.870
LOC113451913
Catenin beta-1-like.
    
 0.870
CDH12
Cadherin 12.
    
 
0.821
CDH5
Cadherin 5.
     
0.758
CTNND1
Catenin delta 1.
    
 0.752
PKP4
Plakophilin 4.
    
 0.752
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.