STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CGNL1Cingulin like 1. (1284 aa)    
Predicted Functional Partners:
ARHGEF2
Rho/Rac guanine nucleotide exchange factor 2.
     
 0.936
ENSPTXP00000018340
annotation not available
    
 0.883
ENSPTXP00000024857
annotation not available
    
 0.883
LOC113453066
Tight junction protein ZO-1-like.
    
 0.883
TRAPPC4
Trafficking protein particle complex 4.
    
 0.874
TRAPPC1
Trafficking protein particle complex 1.
    
 0.874
TRAPPC2B
Trafficking protein particle complex 2.
    
 0.871
TRAPPC6B
Trafficking protein particle complex 6B.
    
 0.871
TRAPPC5
Trafficking protein particle complex 5.
    
 0.868
TRAPPC8
Trafficking protein particle complex 8.
    
 0.862
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.