STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDH10Cadherin 10. (789 aa)    
Predicted Functional Partners:
JUP
Junction plakoglobin.
    
 0.848
CDH18
Cadherin 18.
  
0.812
CDH7
Cadherin-7.
  
  
0.802
CDH20
Cadherin 20.
     
0.800
CDH12
Cadherin 12.
  
  
0.790
CDH22
Cadherin 22.
  
 
 
0.780
LOC113447577
Catenin beta-1.
    
 0.777
LOC113451913
Catenin beta-1-like.
    
 0.777
CDH11
Cadherin 11.
  
  
0.772
CDH17
Cadherin 17.
     
0.767
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.