STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB3DRAB3D, member RAS oncogene family. (220 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
 0.975
SNAP25
Synaptosome associated protein 25.
   
 0.821
CHM
CHM Rab escort protein.
    
 0.789
SYT4
Synaptotagmin 4.
   
 0.757
SYT11
Synaptotagmin 11.
   
 0.757
SYT2
Synaptotagmin 2.
   
 0.751
SYT1
Synaptotagmin 1.
   
 0.751
SYT5
Synaptotagmin 5.
   
 0.743
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.742
SLC18A3
Solute carrier family 18 member A3.
   
 
 0.737
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.