STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FARSAphenylalanyl-tRNA synthetase subunit alpha. (510 aa)    
Predicted Functional Partners:
FARSB
phenylalanyl-tRNA synthetase subunit beta.
  
 0.999
LRRC47
Leucine rich repeat containing 47.
  
 0.998
FARS2
phenylalanyl-tRNA synthetase 2, mitochondrial.
   
 
0.942
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
  
  
 0.928
YARS1
tyrosyl-tRNA synthetase 1.
  
 
 0.904
VARS1
valyl-tRNA synthetase 1.
  
  
 0.889
FDXACB1
Ferredoxin-fold anticodon binding domain containing 1.
   
 
 0.833
DDX56
DEAD-box helicase 56.
  
   0.805
ALG3
ALG3 alpha-1,3- mannosyltransferase.
     
 0.801
MYBBP1A
MYB binding protein 1a.
   
    0.777
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.