STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTAR1Protein prenyltransferase alpha subunit repeat containing 1. (433 aa)    
Predicted Functional Partners:
RABGGTB
Rab geranylgeranyltransferase subunit beta.
    
 0.991
CHM
CHM Rab escort protein.
   
 0.972
YKT6
YKT6 v-SNARE homolog.
    
 
 0.941
SKP1
S-phase kinase associated protein 1.
    
 
 0.921
FBXL20
F-box and leucine rich repeat protein 20.
    
 
 0.831
RAB26
RAB26, member RAS oncogene family.
    
 0.797
RAB7B
RAB7B, member RAS oncogene family.
    
 0.723
ENSPTXP00000015998
annotation not available
    
 
 0.692
RAB30
RAB30, member RAS oncogene family.
    
  0.690
RAB9A
RAB9A, member RAS oncogene family.
    
 0.684
Your Current Organism:
Pseudonaja textilis
NCBI taxonomy Id: 8673
Other names: MNHP 3944, P. textilis, eastern brown snake
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.