STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000516515_02663Unannotated protein. (269 aa)    
Predicted Functional Partners:
GCA_000516515_03485
Unannotated protein.
 
   0.916
GCA_000516515_02664
Unannotated protein.
       0.827
GCA_000516515_02665
Unannotated protein.
       0.827
GCA_000516515_02662
Unannotated protein.
  
    0.746
GCA_000516515_02998
Unannotated protein.
 
 
 0.630
GCA_000516515_03618
Unannotated protein.
 
  
 0.422
GCA_000516515_03605
Unannotated protein.
 
   
 0.407
GCA_000516515_02484
Unannotated protein.
 
 
  0.400
Your Current Organism:
Chloroflexus sp. Y3961
NCBI taxonomy Id: 867845
Other names: C. sp. Y-396-1, Chloroflexus sp. Y-396-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.