Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ADY29487.1Xylose isomerase domain-containing protein TIM barrel; COGs: COG1082 Sugar phosphate isomerase/epimerase; InterPro IPR012307: IPR011418; KEGG: rbi:RB2501_05700 hypothetical protein; PFAM: Xylose isomerase, TIM barrel domain; AP endonuclease, family 2, C-terminal; SPTR: Putative uncharacterized protein; PFAM: AP endonuclease family 2 C terminus; Xylose isomerase-like TIM barrel. (350 aa)    
Predicted Functional Partners:
ADY29485.1
Protein of unknown function DUF1080; InterPro IPR010496; KEGG: rbi:RB2501_05690 putative multi-domain protein; PFAM: Protein of unknown function DUF1080; SPTR: Putative multi-domain protein; PFAM: Domain of Unknown Function (DUF1080).
 
     0.882
ADY29489.1
Oxidoreductase domain protein; COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683: IPR004104; KEGG: rbi:RB2501_05720 oxidoreductase, Gfo/Idh/MocA family protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; SPTR: Oxidoreductase, Gfo/Idh/MocA family protein; PFAM: Oxidoreductase family, NAD-binding Rossmann fold.
 
  
 0.830
ADY29486.1
Protein of unknown function DUF1080; InterPro IPR010496; KEGG: rbi:RB2501_05695 probable secreted glycosyl hydrolase; PFAM: Protein of unknown function DUF1080; SPTR: Probable secreted glycosyl hydrolase; PFAM: Domain of Unknown Function (DUF1080).
 
     0.799
ADY29491.1
Glucose-methanol-choline oxidoreductase; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR006076: IPR000172; KEGG: rbi:RB2501_05745 oxidoreductase, GMC family protein; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; FAD dependent oxidoreductase; SPTR: Oxidoreductase, GMC family protein; PFAM: GMC oxidoreductase.
 
     0.741
ADY29488.1
ASCH domain protein; COGs: COG4405 conserved hypothetical protein; InterPro IPR007374; KEGG: fbc:FB2170_04955 hypothetical protein; PFAM: ASCH domain; SPTR: Putative uncharacterized protein; PFAM: ASCH domain.
       0.510
ADY29484.1
Conserved hypothetical protein CHP00255; COGs: COG1561 Uncharacterized stress-induced protein; InterPro IPR005229: IPR013527: IPR013551; KEGG: fbc:FB2170_04945 hypothetical protein; PFAM: YicC-like, N-terminal; Domain of unknown function DUF1732; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00255; PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: conserved hypothetical protein TIGR00255.
       0.447
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
       0.445
nadD
Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).
       0.439
ADY30387.1
COGs: COG3828 conserved hypothetical protein; KEGG: phe:Phep_0731 Crp/FNR family transcriptional regulator; SPTR: Crp/FNR family transcriptional regulator; PFAM: Trehalose utilisation.
 
  
 0.433
ADY29492.1
KEGG: fbc:FB2170_04985 hypothetical protein; SPTR: Putative uncharacterized protein.
 
     0.403
Your Current Organism:
Cellulophaga lytica
NCBI taxonomy Id: 867900
Other names: C. lytica DSM 7489, Cellulophaga lytica ATCC 23178, Cellulophaga lytica DSM 7489, Cellulophaga lytica IAM 14306, Cellulophaga lytica str. DSM 7489, Cellulophaga lytica strain DSM 7489
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