STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFL96262.1Outer membrane protein/protective antigen OMA87; PFAM: Surface antigen. (854 aa)    
Predicted Functional Partners:
AFL96315.1
Beta-barrel assembly machine subunit BamD; TIGRFAM: outer membrane assembly lipoprotein YfiO.
 
 
 0.844
AFL96447.1
Hypothetical protein.
 
   
 0.812
AFL98497.1
PFAM: Domain of Unknown Function (DUF349).
  
 
   0.788
AFL97541.1
Putative metal-binding protein, possibly nucleic-acid binding protein; PFAM: Uncharacterized ACR, COG1399.
  
    0.761
AFL97013.1
Hypothetical protein.
  
   
 0.760
AFL96441.1
Organic solvent tolerance protein OstA; PFAM: OstA-like protein.
  
  
 0.720
AFL98274.1
Hypothetical protein.
  
     0.712
AFL97439.1
Hypothetical protein.
  
     0.693
AFL97883.1
Hypothetical protein.
  
   
 0.693
AFL98084.1
Hypothetical protein.
  
   
 0.688
Your Current Organism:
Ornithobacterium rhinotracheale
NCBI taxonomy Id: 867902
Other names: O. rhinotracheale DSM 15997, Ornithobacterium rhinotracheale DSM 15997, Ornithobacterium rhinotracheale LMG 9086, Ornithobacterium rhinotracheale str. DSM 15997, Ornithobacterium rhinotracheale strain DSM 15997
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.